BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007B02SP1|AL425634
(796 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1082 1548 0.0
>3x_Contig1082
Length = 4646
Score = 1548 bits (779), Expect = 0.0
Identities = 792/797 (99%), Gaps = 1/797 (0%)
Strand = Plus / Minus
Query: 1 gatccgctttgaawatttccatgtcatggcatattccatgccattacaatttccaaatga 60
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3889 gatccgctttgaaaagttccatgtcatggcatattccatgccattacaatttccaaatga 3830
Query: 61 caacttgcgcta-ctttagtcgaaagtccccgcaccgctcgttatcattatcacatagak 119
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3829 caacttgcgctagctttagtcgaaagtccccgcaccgctcgttatcattatcacatagag 3770
Query: 120 gatattttgtcactctgtcactgccagaaaacgattaacattattccaaagggtagttaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3769 gatattttgtcactctgtcactgccagaaaacgattaacattattccaaagggtagttaa 3710
Query: 180 gtgaaagttaccccgatttatggtctgtgtgaagaacgacagcgcgcgaaactgaattcc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3709 gtgaaagttaccccgatttatggtctgtgtgaagaacgacagcgcgcgaaactgaattcc 3650
Query: 240 gggttttgcgcgtagtggactgtgaaacctcgctcttcgatgcacttaggggagtgaact 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3649 gggttttgcgcgtagtggactgtgaaacctcgctcttcgatgcacttaggggagtgaact 3590
Query: 300 ttttcacaatataaaaagtgatcttaaagctgttggttttgacaaagaaaacgatggaac 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3589 ttttcacaatataaaaagtgatcttaaagctgttggttttgacaaagaaaacgatggaac 3530
Query: 360 aggtgcttgagtagcagtaagacagtatgctagataagttaaaggttccttataacagga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3529 aggtgcttgagtagcagtaagacagtatgctagataagttaaaggttccttataacagga 3470
Query: 420 tatagtttatatgaaaattaatatatccaaacttcatgaaaactttaaactggaagttaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3469 tatagtttatatgaaaattaatatatccaaacttcatgaaaactttaaactggaagttaa 3410
Query: 480 aaatgctggttcttcggatgaagaaataaatacgatacggactattttctctggaaaaga 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3409 aaatgctggttcttcggatgaagaaataaatacgatacggactattttctctggaaaaga 3350
Query: 540 gatccctgaagagtatctttgttttatatctcaagtttcagaagctgaaattttagtaca 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3349 gatccctgaagagtatctttgttttatatctcaagtttcagaagctgaaattttagtaca 3290
Query: 600 aggaaagtcatatattagamtatggggcgctgaaggatgtattgagatgaatgaatctta 659
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 3289 aggaaagtcatatattagaatatggggcgctgaaggatgtattgagatgaatgaatctta 3230
Query: 660 tcatattcaaaaatatattcctaatgcaatagctataggagatgatgaagggggacaggt 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3229 tcatattcaaaaatatattcctaatgcaatagctataggagatgatgaagggggacaggt 3170
Query: 720 aatattttatgcaacaggagatgatggttatggtctatataaagtaggattcggaaatct 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3169 aatattttatgcaacaggagatgatggttatggtctatataaagtaggattcggaaatct 3110
Query: 780 tgatattgaggatgctg 796
|||||||||||||||||
Sbjct: 3109 tgatattgaggatgctg 3093
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6033
Number of Sequences: 1807
Number of extensions: 6033
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 796
length of database: 10,358,551
effective HSP length: 16
effective length of query: 780
effective length of database: 10,329,639
effective search space: 8057118420
effective search space used: 8057118420
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)